Peer-reviewed Journals:
2024:
2019
2018
2017
2015
2014
2013
2012
2011
2010 (as an undergraduate student)
N. Pellegrino*, P.Fieguth^, P. Hajireza “K-Means for noise-insensitive multi-dimensional feature learning,”
Pattern Recognition Letters. Accepted, Pattern Recognition Letters, 1-9 (2023) – 9 Pages
https://doi.org/10.1016/j.patrec.2023.04.009
2024:
- J. Tweel*, B. Ecclestone*, M. Boktor*, D. Dinakaran***, J. Mackey***, P. HajiReza, "Automated Whole Slide Imaging for Label-Free Histology using Photon Absorption Remote Sensing Microscopy”. IEEE Transactions on Biomedical Engineering 71(6), 2024 10.1109/TBME.2024.3355296
- M. Boktor*, J. Tweel*, B. Ecclestone*, J. Ye, P. Fieguth^,P. HajiReza, "Multi-channel feature extraction for virtual histological staining of photon absorption remote sensing images”. Sci Rep 14, Article 2009, 2024 https://doi.org/10.1038/s41598-024-52588-1
- J. Tweel*, B. Ecclestone*, H. Gaouda-, D. Dinakaran***, M. Wallace, G. Bigras***, J. Mackey***, P. HajiReza, "Photon Absorption Remote Sensing Imaging of Breast Needle Core Biopsies is Diagnostically Equivalent to Gold Standard H&E Histologic Assessment," Current Oncology, 30(11) 9760-9771 (2023) - 12 pages https://doi.org/10.3390/curroncol30110708
- N. Pellegrino*, P. Fieguth^, P. HajiReza, “K-Means for noise-insensitive multi-dimensional feature learning,” Pattern Recognition Letters, 1-8 (2023) – 9 Pages https://doi.org/10.1016/j.patrec.2023.04.009
- L. Mukhangaliyeva*, S. Kocer, A. Warren*, K. Bell**, M. Boktor*, E. Abdel-Rahman^ and P. HajiReza. “Deformable mirror-based photoacoustic remote sensing (PARS) microscopy for depth scanning.” Biomed. Opt. Express 13, 5643-5653 (2022). – 11 Pages https://doi.org/10.1364/BOE.471770
- A. Kamel, S. Kocer, L. Mukhangaliyeva*, M. Basha, R. Saritas, A. Gulsaran, A. Elhady, P. HajiReza, M. Yavuz, and E. Abdel-Rahman^, “Resonant Adaptive MEMS Mirrors”, Actuators, 11(8), 224, 1-12 (2022). – 12 Pages https://doi.org/10.3390/act11080224.
- N. Pellegrino*, B. R. Ecclestone*, D. Dinakaran***, F. van Landeghem***, P. Fieguth^ and P. HajiReza, "Time-Domain Feature Extraction for Target-Specificity in Photoacoustic Remote Sensing Microscopy.” Opt. Lett. 47, 3952-3955 (2022). – 4 Pages https://doi.org/10.1364/OL.457142
- M. Boktor*, B. R. Ecclestone*, V. Pekar-, D. Dinakaran***, J. R. Mackey***, P. Fieguth^ and P. HajiReza, "Virtual Histological Staining of Label-Free Total Absorption Photoacoustic Remote Sensing (TA-PARS).” Scientific Reports, 12, 10296, 1-12 (2022). – 12 Pages https://doi.org/10.1038/s41598-022-14042-y
- B. R. Ecclestone*, K. Bell**, S. Sparkes#, D. Dinakaran***, J. R. Mackey***, and P. HajiReza, “Label-free complete absorption microscopy using second generation photoacoustic remote sensing.” Scientific Reports 12, 8464, 1-17 (2022). – 17 Pages https://doi.org/10.1038/s41598-022-11235-3
- Z. Hosseinaee*, N. Pellegrino*, N. Abbasi*, T. Amiri*, J. A. Tummon Simmons*, P. Fieguth^ and P. HajiReza, "In-vivo functional and structural retinal imaging using multiwavelength photoacoustic remote sensing microscopy" Scientific Reports 12, 4562, 1-10 (2022). – 10 Pages https://doi.org/10.1038/s41598-022-08508-2
- Zohreh Hosseinaee*, Benjamin Ecclestone*, Nicholas Pellegrino*, Layla Khalili*, Lyazzat Mukhangaliyeva*, Paul Fieguth, and Parsin Haji Reza, "Functional photoacoustic remote sensing microscopy using a stabilized temperature-regulated stimulated Raman scattering light source," Optics Express (29(19), 29745-29754. (2021).
- Kevan Bell*, Lyazzat Mukhangaliyeva*, Layla Khalili*, and Parsin Haji Reza, "Hyperspectral absorption microscopy using photoacoustic remote sensing," Optics Express 29(15), 24338-24348. (2021).
- Benjamin R. Ecclestone*, Zohreh Hosseinaee*, Nima Abbasi*, Kevan Bell*, Deepak Dinakaran, John Mackey, and Parsin Haji Reza, "Three-Dimensional Virtual Histology in Unprocessed Resected Tissue with Photoacoustic Remote Sensing (PARS®) Microscopy and Optical Coherence Tomography," Scientific Reports 11, 13723 (2021).
- Zohreh Hosseinaee*, Nima Abbasi*, Nicholas Pellegrino*, Layla Khalili*, Lyazzat Mukhangaliyeva*, and Parsin Haji Reza “Functional and structural ophthalmic imaging using noncontact multimodal photoacoustic remote sensing microscopy and optical coherence tomography," Scientific Reports 11, 11466 (2021).
- Benjamin R. Ecclestone*, Deepak Dinakaran, Parsin Haji Reza, "Single Acquisition Label-free Histology-like Imaging with Dual Contrast Photoacoustic Remote Sensing Microscopy." J. of Biomedical Optics, 26(5), 056007 (2021).
- Benjamin R. Ecclestone*, Saad Abbasi, Kevan Bell*, Deepak Dinakaran, Gilbert Bigras, John R. Mackey, Parsin Haji Reza, Towards virtual biopsies of gastrointestinal tissues using photoacoustic remote sensing microscopy, Quant Imaging Med Surg 11(3), 1070-1077 (2021).
- Saad Abbasi, Kevan Bell*, Benjamin Ecclestone*, Parsin Haji Reza, "Live feedback and 3D photoacoustic remote sensing, " Quant Imaging Med Surg, 11(3), 1033-1045 (2021).
- Zohreh Hosseinaee*, James A. Tummon Simmons*, Parsin Haji Reza, "Dual-modal photoacoustic imaging and optical coherence tomography [Review]", Front. Phys. 8:616618. (2021).
- Benjamin R. Ecclestone*, Kevan Bell*, Saad Abbasi, Deepak Dinakaran, Muba Taher, John R. Mackey, and Parsin Haji Reza, "Histopathology for Mohs Micrographic Surgery with Photoacoustic Remote Sensing Microscopy," Biomed. Opt. Express 12, 654-665 (2021).
- Zohreh Hosseinaee*, Layla Khalili*, James A. Tummon Simmons*, Kevan Bell*, Parsin Haji Reza "Label-free, non-contact, in-vivo ophthalmic imaging using photoacoustic remote sensing microscopy" Opt. Lett. 45, 6254-6257 (2020).
- Kevan Bell*, Saad Abbasi*, Deepak Dinakaran, Muba Taher, Gilbert Bigras, Frank K.H. van Landeghem, John R. Mackey, Parsin Haji Reza, :Reflection-mode virtual histology using photoacoustic remote sensing microscopy", Scientific Reports, 10, 19121 (2020).
- Benjamin R. Ecclestone*, Kevan Bell*, Saad Abbasi*, Deepak Dinakaran, Frank K.H. van Landeghem, John R. Mackey, Paul Fieguth, Parsin Haji Reza “Improving maximal safe brain tumor resection with photoacoustic remote sensing microscopy. ” Scientific Reports. 10, 17211 (2020).
- Zohreh Hosseinaee*, Martin Le*, Kevan Bell*, Parsin Haji Reza “Towards non-contact photoacoustic imaging [review].” Photoacoustics, 20, 100207 (2020).
- Saad Abbasi*, Deepak Dinakaran, Gilbert Bigras, John R. Mackey, Parsin Haji Reza, "All-optical Label-free Human Breast Tissue Block Histology using Photoacoustic Remote Sensing", Opt. Lett. 45, 4770-4773 (2020).
- Kevan Bell* and Parsin Haji Reza, "Non-contact reflection-mode optical absorption spectroscopy using photoacoustic remote sensing," Opt. Lett. 45, 3427-3430 (2020).
- Saad Rasheed Abassi*, Kevan Bell*, Parsin Haji Reza, ”Rapid High-Resolution Mosaic Acquisition for Photoacoustic Remoting Sensing”, Sensors, 20(4), 1027; (2020).
2019
- Saad Abbasi*, Martin Le*, Bazil Sonier*, Kevan Bell*, Deepak Dinakaran, Gilbert Bigras, John R. Mackey, and Parsin Haji Reza, "Chromophore selective multi-wavelength photoacoustic remote sensing of unstained human tissues," Biomed. Opt. Express 10, 5461-5469 (2019).
- Saad Abbasi*, Martin Le*, Bazil Sonier*, Deepak Dinakaran, Gilbert Bigras, Kevan Bell*, John R. Mackey, Parsin Haji Reza, “All-optical Reflection-mode Microscopic Histology of Unstained Human Tissues” Scientific Reports 9, 13392 (2019).
- Jasmine Chan*, Zhou Zheng, Kevan Bell*, Martin Le*, Parsin Haji Reza, John T.W Yeow, “Photoacoustic Imaging with Capacitive Micromachined Ultrasound Transducers: Principles and Developments” Sensors 2019 Aug 20;19(16). pii: E3617.
- Kevan L. Bell (equal contribution), Parsin Haji Reza (equal contribution), and Roger J. Zemp, "Real-time functional photoacoustic remote sensing microscopy," Opt. Lett. 44, 3466-3469 (2019).
2018
- Kevan L. Bell, Parsin Haji Reza, and Roger J. Zemp, "Coherence-gated photoacoustic remote sensing microscopy," Opt. Express 26, 23689-23704 (2018).
- Parsin Haji Reza, Kevan Bell, Wei Shi, James Shapiro, and Roger J. Zemp, "Deep non-contact photoacoustic initial pressure imaging," Optica 5, 814-820 (2018)( Impact factor 9.2).
- Kevan Bell, Parsin Haji Reza, and Roger Zemp, "Scattering cross-sectional modulation in photoacoustic remote sensing microscopy," Opt. Lett. 43, 146-149 (2018)
2017
- Kevan L. Bell, Parsin Haji Reza, Wei Shi, and Roger J. Zemp, "Temporal evolution of low-coherence reflectometry signals in photoacoustic remote sensing microscopy," Appl. Opt. 56, 5172-5181 (2017).
- Parsin Haji Reza, Wei Shi, Kevan Bell, Robert J. Paproski and Roger Zemp, “Non-Interferometric Photoacoustic Remote Sensing Microscopy” Nature’s Light: Science & Applications (2017) 6, e16278; doi: 10.1038/lsa.2016.278 (Impact Factor: 14.1)
2015
- Parsin Haji Reza, Jason Sorge, Michael Brett, and Roger Zemp, "In vivo optical resolution photoacoustic microscopy using glancing angle-deposited nanostructured Fabry–Perot etalons," Opt. Lett. 40, 1350-1353 (2015) (4 pages)
2014
- Parsin Haji Reza, Alexander Forbrich and Roger J. Zemp" In-vivo functional optical-resolution photoacoustic microscopy with stimulated Raman scattering fiber-laser source" "Biomed. Opt. Express 5, 539-546 (2014) (8 pages)
2013
- Shi, W., Shao, Parsin Haji Reza, P., Forbrich, A. and Zemp, R. J., “In vivo dynamic process imaging using real-time optical-resolution photoacoustic microscopy ”, J. Biomed. Opt. 18, 026001 (2013) (5 pages)
- Parsin Haji Reza, Tyler Harrison, Alexander Forbrich and Roger Zemp "Optical resolution photoacoustic microendoscopy with ultrasound-guided insertion and array system detection", J. Biomed. Opt. Letters 18(9), 090502 (Sep 25, 2013). (3 pages)
- Parsin Haji Reza, Alexander Forbrich, and Roger J. Zemp, "Multifocus optical-resolution photoacoustic microscopy using stimulated Raman scattering and chromatic aberration," Opt. Lett. 38, 2711-2713 (2013) (also Vol. 8, Iss. 9 Virtual Journal for Biomedical Optics) (3 pages)
- Parsin Haji Reza, Kathleen Krause, Michael Brett, and Roger Zemp, "Glancing angle deposited nanostructured film Fabry-Perot etalons for optical detection of ultrasound," Optics Express 21, 6391-6400 (2013) (also Vol. 8, Iss. 4 Virtual Journal for Biomedical Optics) (10 pages)
- Parsin Haji Reza, W. Shi and R. J. Zemp, "Label-Free In Vivo GRIN-Lens Optical Resolution Photoacoustic Micro-Endoscopy ", Laser Phys. Lett. 10 055603 (2013). (3 pages)
2012
- Peng Shao, Wei Shi, Parsin Haji Reza, and Roger J. Zemp, "Integrated micro-endoscopy system for simultaneous fluorescence and optical-resolution photoacoustic imaging ", J. Biomed. Opt. 17, 076024 (2012). (4 pages)
2011
- Wei Shi, Parsin Haji Reza, Peng Shao, Alexander Forbrich, and Roger J. Zemp, "In vivo near-realtime volumetric optical-resolution photoacoustic microscopy using a high-repetition-rate nanosecond fiber-laser," Opt. Express 19, 17143-17150 (2011) (also Vol. 6, Iss. 9 Virtual Journal for Biomedical Optics) (8 Pages).
- Parsin Haji Reza, W. Shi, and R. J. Zemp, "Label-free in vivo fiber-based optical-resolution photoacoustic microscopy," Opt. Lett. 36, 4107-4109 (2011) (also Vol. 6, Iss. 11 Virtual Journal for Biomedical Optics) (3 pages).
- Parsin Haji Reza, Wei Shi, and Roger J. Zemp, "Real-time handheld optical-resolution photoacoustic microscopy," Opt. Express 19, 20097-20102 (2011) ( also Vol. 6, Iss. 11 Virtual Journal for Biomedical Optics ) (6 Pages).
2010 (as an undergraduate student)
- S. D. Emami, Parsin Haji Reza, F. Abd-Rahman, H. A. Abdul-Rashid, H. Ahmad, and S. W. Harun "wide-band hybrid amplifier operating in s-band region”,Progress In Electromagnetics Research, PIER 102, 301- 313, 2010, (13 pages).
- S. D. Emami, Parsin Haji Reza, F. Abd-rahman, H. A. Abdul-rashid, H. Ahmad, S. W. Harun," Application of high concentration thulium-doped fiber for achieving S-band gain flattened hybrid optical amplifier" Journal of Optoelectronics and Advanced Materials, Vol.12, ISS.7, p. 1446 - 1451, 2010, (6 pages). (6 pages).
- Parsin Haji Reza , S. D. Emami, C. L. Cham, D. Kumar, S. W. Harun and H. A. Abdul-Rashid” Linear All-fiber Temperature Sensor based on Macro-Bent Erbium Doped Fiber” ,Laser Phys. Lett., vol. 7, No. 10, pp. 739-742, Wiley 2010, (4 pages).
- Parsin Haji Reza, S. D. Emami, S. Abbasizargaleh, S. W. Harun and H. A. Abdul-Rashid “Optimization of gain flattened C-band EDFA using macro-bending” Laser Physics Journal, Vol. 20, No. 6, pp. 1433-1437, Springer 2010, (5 pages).
- Parsin Haji Reza, S. D. Emami, S. Abbasizargaleh, S. W. Harun, D. Kumar, and H. A. Abdul-Rashid, "Temperature insensitive broad and flat gain c-band edfa based on macro-bending," Progress In Electromagnetics Research,PIER C, Vol. 15, 37-48, 2010. (11 pages).
- Parsin Haji Reza, Emami, S. D., Abbasizargaleh, S., Harun, S. W., Kumar, D. & Abdul-Rashid, H. A. ,”Application of macro-bending for flat and broad gain EDFA. Journal of Modern Optics”, 57(16), 1534-1541. (2010). (8 pages).
N. Pellegrino*, P.Fieguth^, P. Hajireza “K-Means for noise-insensitive multi-dimensional feature learning,”
Pattern Recognition Letters. Accepted, Pattern Recognition Letters, 1-9 (2023) – 9 Pages
https://doi.org/10.1016/j.patrec.2023.04.009